AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

• AAI clade 1 medoid: GCA 017502845 1
  • AAI clade 1-1 medoid: GCA 900546775 1
  • AAI clade 1-2 medoid: GCA 905221215 1
  • AAI clade 1-3 medoid: GCF 015326965 1
  • AAI clade 1-4 medoid: GCF 900094905 1
  • AAI clade 1-5 medoid: GCF 008764295 1
  • AAI clade 1-6 medoid: GCA 900551895 1
  • AAI clade 1-7 medoid: GCF 009193305 1
  • AAI clade 1-8 medoid: GCA 017503135 1
  • AAI clade 1-9 medoid: GCA 900552565 1
  • AAI clade 1-10 medoid: GCA 017411305 1
  • AAI clade 1-11 medoid: GCF 001465345 1
  • AAI clade 1-12 medoid: GCA 900759455 1
  • AAI clade 1-13 medoid: GCF 015207245 1
  • AAI clade 1-14 medoid: GCA 017960805 1
    • AAI clade 1-14-1 medoid: GCA 017960805 1
      • AAI clade 1-14-1-1 medoid: GCA 017960805 1
      • AAI clade 1-14-1-2 medoid: GCA 001940925 1
      • AAI clade 1-14-1-3 medoid: GCF 900108555 1
        • AAI clade 1-14-1-3-1 medoid: GCA 001604035 1
        • AAI clade 1-14-1-3-2 medoid: GCF 900119075 1
        • AAI clade 1-14-1-3-3 medoid: GCA 002373775 1
        • AAI clade 1-14-1-3-4 medoid: GCF 900108555 1
        • AAI clade 1-14-1-3-5 medoid: GCA 009177225 1
        • AAI clade 1-14-1-3-6 medoid: GCA 015066935 1
        • AAI clade 1-14-1-3-7 medoid: GCA 015067005 1
        • AAI clade 1-14-1-3-8 medoid: GCA 017961625 1
        • AAI clade 1-14-1-3-9 medoid: GCA 016288815 1
        • AAI clade 1-14-1-3-10 medoid: GCA 900318825 1
        • AAI clade 1-14-1-3-11 medoid: GCF 000174895 1
          3 datasets: GCA 017418765 1 (AAI: 81.58%), GCA 902792495 1 (AAI: 81.87%), and GCF 000174895 1 (AAI: 100.0%)
        • AAI clade 1-14-1-3-12 medoid: GCA 017441505 1
        • AAI clade 1-14-1-3-13 medoid: GCA 905199285 1
        • AAI clade 1-14-1-3-14 medoid: GCA 017479805 1
        • AAI clade 1-14-1-3-15 medoid: GCA 017513795 1
        • AAI clade 1-14-1-3-16 medoid: GCF 000621785 1
        • AAI clade 1-14-1-3-17 medoid: GCA 017525915 1
        • AAI clade 1-14-1-3-18 medoid: GCA 017543595 1
        • AAI clade 1-14-1-3-19 medoid: GCA 017935095 1
        • AAI clade 1-14-1-3-20 medoid: GCA 900319195 1
        • AAI clade 1-14-1-3-21 medoid: GCA 900540005 1
        • AAI clade 1-14-1-3-22 medoid: GCA 900545125 1
      • AAI clade 1-14-1-4 medoid: GCF 000157955 1
      • AAI clade 1-14-1-5 medoid: GCA 015066975 1
    • AAI clade 1-14-2 medoid: GCA 002363155 1
    • AAI clade 1-14-3 medoid: GCA 017471405 1
    • AAI clade 1-14-4 medoid: GCA 902780785 1
    • AAI clade 1-14-5 medoid: GCA 900541355 1
  • AAI clade 1-15 medoid: GCA 001604115 1
  • AAI clade 1-16 medoid: GCA 900551775 1
  • AAI clade 1-17 medoid: GCA 016929555 1
  • AAI clade 1-18 medoid: GCF 004770145 1
  • AAI clade 1-19 medoid: GCF 004745505 1
  • AAI clade 1-20 medoid: GCA 900761225 1
  • AAI clade 1-21 medoid: GCA 900556695 1
  • AAI clade 1-22 medoid: GCA 017504995 1
  • AAI clade 1-23 medoid: GCA 900550055 1
  • AAI clade 1-24 medoid: GCA 017464135 1
  • AAI clade 1-25 medoid: GCA 014860805 1
• AAI clade 2 medoid: GCA 002434265 1
• AAI clade 3 medoid: GCA 013002175 1
• AAI clade 4 medoid: GCA 900110395 1
• AAI clade 5 medoid: GCA 012798955 1
• AAI clade 6 medoid: GCA 013415575 1
• AAI clade 7 medoid: GCF 008638345 1
• AAI clade 8 medoid: GCF 000807255 1
• AAI clade 9 medoid: GCF 001050135 1
• AAI clade 10 medoid: GCA 002717245 1
• AAI clade 11 medoid: GCA 017478625 1
• AAI clade 12 medoid: GCA 009773355 1
• AAI clade 13 medoid: GCA 905200435 1
• AAI clade 14 medoid: GCA 017516885 1
• AAI clade 15 medoid: GCA 004321885 1
• AAI clade 16 medoid: GCA 905236305 1
• AAI clade 17 medoid: GCA 017648525 1
• AAI clade 18 medoid: GCA 019113065 1
• AAI clade 19 medoid: GCA 016795075 1
• AAI clade 20 medoid: GCF 001467025 1
• AAI clade 21 medoid: GCA 017642855 1
• AAI clade 22 medoid: GCA 017408305 1
• AAI clade 23 medoid: GCA 002436405 1