AAI clade 1-14-1-1-2-2-1-8-3

AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

AAI clade 1 medoid: GCA 017502845 1
- AAI clade 1-1 medoid: GCA 900546775 1
- AAI clade 1-2 medoid: GCA 905221215 1
- AAI clade 1-3 medoid: GCF 015326965 1
- AAI clade 1-4 medoid: GCF 900094905 1
- AAI clade 1-5 medoid: GCF 008764295 1
- AAI clade 1-6 medoid: GCA 900551895 1
- AAI clade 1-7 medoid: GCF 009193305 1
- AAI clade 1-8 medoid: GCA 017503135 1
- AAI clade 1-9 medoid: GCA 900552565 1
- AAI clade 1-10 medoid: GCA 017411305 1
- AAI clade 1-11 medoid: GCF 001465345 1
- AAI clade 1-12 medoid: GCA 900759455 1
- AAI clade 1-13 medoid: GCF 015207245 1
- AAI clade 1-14 medoid: GCA 017960805 1
  - AAI clade 1-14-1 medoid: GCA 017960805 1
    
    AAI clade 1-14-1-1 medoid: GCA 017960805 1
    
    AAI clade 1-14-1-1-1 medoid: GCA 009392675 1
    
    AAI clade 1-14-1-1-2 medoid: GCA 017960805 1
    
    AAI clade 1-14-1-1-2-1 medoid: GCA 000980705 1
    
    AAI clade 1-14-1-1-2-2 medoid: GCA 017960805 1
    
    AAI clade 1-14-1-1-2-2-1 medoid: GCA 017960805 1
    
    AAI clade 1-14-1-1-2-2-1-1 medoid: GCA 000995065 1
    
    AAI clade 1-14-1-1-2-2-1-2 medoid: GCA 001029735 1
    
    AAI clade 1-14-1-1-2-2-1-3 medoid: GCA 001872305 1
    
    AAI clade 1-14-1-1-2-2-1-4 medoid: GCA 903932805 1
    
    AAI clade 1-14-1-1-2-2-1-5 medoid: GCA 902362965 1
    
    AAI clade 1-14-1-1-2-2-1-6 medoid: GCA 018715465 1
    
    AAI clade 1-14-1-1-2-2-1-7 medoid: GCA 002338125 1
    
    AAI clade 1-14-1-1-2-2-1-8 medoid: GCF 900109435 1
    
    AAI clade 1-14-1-1-2-2-1-8-1 medoid: GCF 900109435 1
    
    AAI clade 1-14-1-1-2-2-1-8-2 medoid: GCA 017620025 1
    
    AAI clade 1-14-1-1-2-2-1-8-3 medoid: GCA 017460665 1
    
    2 datasets: GCA 017460665 1 (AAI: 100.0%) and GCA 902760805 1 (AAI: 83.55%)
    
    AAI clade 1-14-1-1-2-2-1-9 medoid: GCA 002362175 1
    
    AAI clade 1-14-1-1-2-2-1-10 medoid: GCA 002365855 1
    
    AAI clade 1-14-1-1-2-2-1-11 medoid: GCA 002366995 1
    
    AAI clade 1-14-1-1-2-2-1-12 medoid: GCA 015066925 1
    
    AAI clade 1-14-1-1-2-2-1-13 medoid: GCA 002440965 1
    
    AAI clade 1-14-1-1-2-2-1-14 medoid: GCA 002452855 1
    
    AAI clade 1-14-1-1-2-2-1-15 medoid: GCA 002719695 1
    
    AAI clade 1-14-1-1-2-2-1-16 medoid: GCA 018675575 1
    
    AAI clade 1-14-1-1-2-2-1-17 medoid: GCA 002774365 1
    
    AAI clade 1-14-1-1-2-2-1-18 medoid: GCF 900104615 1
    
    AAI clade 1-14-1-1-2-2-1-19 medoid: GCA 003554915 1
    
    AAI clade 1-14-1-1-2-2-1-20 medoid: GCA 003978805 1
    
    AAI clade 1-14-1-1-2-2-1-21 medoid: GCF 000210095 1
    
    AAI clade 1-14-1-1-2-2-1-22 medoid: GCA 005239585 1
    
    AAI clade 1-14-1-1-2-2-1-23 medoid: GCA 005791325 1
    
    AAI clade 1-14-1-1-2-2-1-24 medoid: GCA 005808865 1
    
    AAI clade 1-14-1-1-2-2-1-25 medoid: GCA 008086245 1
    
    AAI clade 1-14-1-1-2-2-1-26 medoid: GCA 009002475 1
    
    AAI clade 1-14-1-1-2-2-1-27 medoid: GCA 009692905 1
    
    AAI clade 1-14-1-1-2-2-1-28 medoid: GCA 017531485 1
    
    AAI clade 1-14-1-1-2-2-1-29 medoid: GCA 009782975 1
    
    AAI clade 1-14-1-1-2-2-1-30 medoid: GCA 009784335 1
    
    AAI clade 1-14-1-1-2-2-1-31 medoid: GCA 903825355 1
    
    AAI clade 1-14-1-1-2-2-1-32 medoid: GCA 013153295 1
    
    AAI clade 1-14-1-1-2-2-1-33 medoid: GCA 013696525 1
    
    AAI clade 1-14-1-1-2-2-1-34 medoid: GCA 014360495 1
    
    AAI clade 1-14-1-1-2-2-1-35 medoid: GCA 014799485 1
    
    AAI clade 1-14-1-1-2-2-1-36 medoid: GCA 017440755 1
    
    AAI clade 1-14-1-1-2-2-1-37 medoid: GCA 017463375 1
    
    AAI clade 1-14-1-1-2-2-1-38 medoid: GCA 015068565 1
    
    AAI clade 1-14-1-1-2-2-1-39 medoid: GCA 017531805 1
    
    AAI clade 1-14-1-1-2-2-1-40 medoid: GCA 015233565 1
    
    AAI clade 1-14-1-1-2-2-1-41 medoid: GCA 015489035 1
    
    AAI clade 1-14-1-1-2-2-1-42 medoid: GCA 015493225 1
    
    AAI clade 1-14-1-1-2-2-1-43 medoid: GCA 016188735 1
    
    AAI clade 1-14-1-1-2-2-1-44 medoid: GCA 016206515 1
    
    AAI clade 1-14-1-1-2-2-1-45 medoid: GCA 016214035 1
    
    AAI clade 1-14-1-1-2-2-1-46 medoid: GCA 016284035 1
    
    AAI clade 1-14-1-1-2-2-1-47 medoid: GCA 016699125 1
    
    AAI clade 1-14-1-1-2-2-1-48 medoid: GCA 017411325 1
    
    AAI clade 1-14-1-1-2-2-1-49 medoid: GCA 017464525 1
    
    AAI clade 1-14-1-1-2-2-1-50 medoid: GCA 017444345 1
    
    AAI clade 1-14-1-1-2-2-1-51 medoid: GCA 017445025 1
    
    AAI clade 1-14-1-1-2-2-1-52 medoid: GCA 902772615 1
    
    AAI clade 1-14-1-1-2-2-1-53 medoid: GCA 017992475 1
    
    AAI clade 1-14-1-1-2-2-1-54 medoid: GCA 019136435 1
    
    AAI clade 1-14-1-1-2-2-1-55 medoid: GCA 903859705 1
    
    AAI clade 1-14-1-1-2-2-1-56 medoid: GCA 900321865 1
    
    AAI clade 1-14-1-1-2-2-1-57 medoid: GCA 900545035 1
    
    AAI clade 1-14-1-1-2-2-1-58 medoid: GCA 903834195 1
    
    AAI clade 1-14-1-1-2-2-1-59 medoid: GCA 903871855 1
    
    AAI clade 1-14-1-1-2-2-1-60 medoid: GCA 903902445 1
    
    AAI clade 1-14-1-1-2-2-1-61 medoid: GCA 903924005 1
    
    AAI clade 1-14-1-1-2-2-2 medoid: GCA 017397925 1
    
    AAI clade 1-14-1-1-2-2-3 medoid: GCA 017435745 1
    
    AAI clade 1-14-1-1-2-3 medoid: GCA 018826445 1
    
    AAI clade 1-14-1-1-2-4 medoid: GCA 001940825 1
    
    AAI clade 1-14-1-1-2-5 medoid: GCF 014201655 1
    
    AAI clade 1-14-1-1-2-6 medoid: GCA 017560765 1
    
    AAI clade 1-14-1-1-2-7 medoid: GCA 902789705 1
    
    AAI clade 1-14-1-1-2-8 medoid: GCA 017415105 1
    
    AAI clade 1-14-1-1-2-9 medoid: GCA 017623475 1
    
    AAI clade 1-14-1-1-3 medoid: GCA 016192645 1
    
    AAI clade 1-14-1-1-4 medoid: GCA 018110825 1
    
    AAI clade 1-14-1-1-5 medoid: GCA 003158175 1
    
    AAI clade 1-14-1-1-6 medoid: GCA 900768005 1
    
    AAI clade 1-14-1-2 medoid: GCA 001940925 1
    
    AAI clade 1-14-1-3 medoid: GCF 900108555 1
    
    AAI clade 1-14-1-4 medoid: GCF 000157955 1
    
    AAI clade 1-14-1-5 medoid: GCA 015066975 1
  - AAI clade 1-14-2 medoid: GCA 002363155 1
  - AAI clade 1-14-3 medoid: GCA 017471405 1
  - AAI clade 1-14-4 medoid: GCA 902780785 1
  - AAI clade 1-14-5 medoid: GCA 900541355 1
- AAI clade 1-15 medoid: GCA 001604115 1
- AAI clade 1-16 medoid: GCA 900551775 1
- AAI clade 1-17 medoid: GCA 016929555 1
- AAI clade 1-18 medoid: GCF 004770145 1
- AAI clade 1-19 medoid: GCF 004745505 1
- AAI clade 1-20 medoid: GCA 900761225 1
- AAI clade 1-21 medoid: GCA 900556695 1
- AAI clade 1-22 medoid: GCA 017504995 1
- AAI clade 1-23 medoid: GCA 900550055 1
- AAI clade 1-24 medoid: GCA 017464135 1
- AAI clade 1-25 medoid: GCA 014860805 1
AAI clade 2 medoid: GCA 002434265 1
AAI clade 3 medoid: GCA 013002175 1
AAI clade 4 medoid: GCA 900110395 1
AAI clade 5 medoid: GCA 012798955 1
AAI clade 6 medoid: GCA 013415575 1
AAI clade 7 medoid: GCF 008638345 1
AAI clade 8 medoid: GCF 000807255 1
AAI clade 9 medoid: GCF 001050135 1
AAI clade 10 medoid: GCA 002717245 1
AAI clade 11 medoid: GCA 017478625 1
AAI clade 12 medoid: GCA 009773355 1
AAI clade 13 medoid: GCA 905200435 1
AAI clade 14 medoid: GCA 017516885 1
AAI clade 15 medoid: GCA 004321885 1
AAI clade 16 medoid: GCA 905236305 1
AAI clade 17 medoid: GCA 017648525 1
AAI clade 18 medoid: GCA 019113065 1
AAI clade 19 medoid: GCA 016795075 1
AAI clade 20 medoid: GCF 001467025 1
AAI clade 21 medoid: GCA 017642855 1
AAI clade 22 medoid: GCA 017408305 1
AAI clade 23 medoid: GCA 002436405 1

AAI-based medoid clustering

A collaboration between