ANI-based medoid clustering
The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.
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ANI clade 1
medoid: uncultured Rothia sp. GCA 946222235 1
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ANI clade 2
medoid: Rothia mucilaginosa GCA 004799365 1
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ANI clade 3
medoid: Rothia aeria GCA 905370405 1
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ANI clade 4
medoid: Rothia sp. ND6WE1A GCA 001683935 1
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ANI clade 5
medoid: Rothia mucilaginosa GCA 001065135 1
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ANI clade 5-1
medoid: Rothia mucilaginosa GCA 001065135 1
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ANI clade 5-1-1
medoid: uncultured Rothia sp. GCA 916048035 1
5 datasets: Rothia sp. HMSC062F03 GCA 001836905 1 (ANI: 97.63%), uncultured Rothia sp. GCA 916048035 1 (ANI: 100.0%), uncultured Rothia sp. GCA 934613715 1 (ANI: 97.39%), uncultured Rothia sp. GCA 900545375 1 (ANI: 97.62%), and Rothia mucilaginosa GCA 001061665 1 (ANI: 97.8%)
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ANI clade 5-1-2
medoid: Rothia sp. HMSC072E10 GCA 001813965 1
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ANI clade 5-1-3
medoid: Rothia sp. HMSC068F09 GCA 001812775 1
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ANI clade 5-1-4
medoid: Rothia mucilaginosa GCA 001065135 1
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ANI clade 5-1-1
medoid: uncultured Rothia sp. GCA 916048035 1
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ANI clade 5-2
medoid: uncultured Rothia sp. GCA 905206255 1
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ANI clade 5-1
medoid: Rothia mucilaginosa GCA 001065135 1
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ANI clade 6
medoid: Rothia sp. P100 GCA 023712425 1
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ANI clade 7
medoid: Rothia sp. ZJ932 GCA 016924835 1
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ANI clade 8
medoid: uncultured Rothia sp. GCA 902373285 1
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ANI clade 9
medoid: uncultured Rothia sp. GCA 902461355 1
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ANI clade 10
medoid: Rothia nasimurium GCA 928382285 1
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ANI clade 11
medoid: Rothia nasisuis GCA 928392685 1
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ANI clade 12
medoid: Rothia nasimurium GCA 928391935 1
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ANI clade 13
medoid: Rothia koreensis GCA 004136575 1
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ANI clade 14
medoid: Rothia kristinae GCA 025150355 1