ANI-based medoid clustering

The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.

  • ANI clade 1 medoid: uncultured Rothia sp. GCA 946222235 1
  • ANI clade 2 medoid: Rothia mucilaginosa GCA 004799365 1
  • ANI clade 3 medoid: Rothia aeria GCA 905370405 1
    • ANI clade 3-1 medoid: Rothia sp. RSM482 GCA 029850825 1
    • ANI clade 3-2 medoid: Rothia aeria GCA 019334745 1
    • ANI clade 3-3 medoid: Rothia aeria GCA 916720985 1
    • ANI clade 3-4 medoid: Rothia sp. Olga GCA 002238135 1
    • ANI clade 3-5 medoid: Rothia aeria GCA 905372695 1
    • ANI clade 3-6 medoid: Rothia aeria GCA 004367605 1
    • ANI clade 3-7 medoid: Rothia aeria GCA 004367615 1
    • ANI clade 3-8 medoid: Rothia aeria GCA 905370405 1
    • ANI clade 3-9 medoid: Rothia aeria GCA 915068235 1
    • ANI clade 3-10 medoid: Rothia aeria GCA 927911145 1
      1 dataset: Rothia aeria GCA 927911145 1 (ANI: 100.0%)
    • ANI clade 3-11 medoid: Rothia aeria GCA 943914265 1
    • ANI clade 3-12 medoid: Rothia aeria GCA 016726365 1
    • ANI clade 3-13 medoid: Rothia aeria GCA 029850955 1
    • ANI clade 3-14 medoid: Rothia aeria GCA 029851025 1
    • ANI clade 3-15 medoid: Rothia aeria GCA 000763685 1
    • ANI clade 3-16 medoid: Rothia aeria GCA 030219075 1
    • ANI clade 3-17 medoid: Rothia aeria GCA 916439555 1
    • ANI clade 3-18 medoid: Rothia aeria GCA 937927245 1
    • ANI clade 3-19 medoid: Rothia aeria F0474 GCA 000258205 1
    • ANI clade 3-20 medoid: Rothia aeria F0184 GCA 000479025 1
    • ANI clade 3-21 medoid: Rothia aeria GCA 900637985 1
  • ANI clade 4 medoid: Rothia sp. ND6WE1A GCA 001683935 1
  • ANI clade 5 medoid: Rothia mucilaginosa GCA 001065135 1
  • ANI clade 6 medoid: Rothia sp. P100 GCA 023712425 1
  • ANI clade 7 medoid: Rothia sp. ZJ932 GCA 016924835 1
  • ANI clade 8 medoid: uncultured Rothia sp. GCA 902373285 1
  • ANI clade 9 medoid: uncultured Rothia sp. GCA 902461355 1
  • ANI clade 10 medoid: Rothia nasimurium GCA 928382285 1
  • ANI clade 11 medoid: Rothia nasisuis GCA 928392685 1
  • ANI clade 12 medoid: Rothia nasimurium GCA 928391935 1
  • ANI clade 13 medoid: Rothia koreensis GCA 004136575 1
  • ANI clade 14 medoid: Rothia kristinae GCA 025150355 1