ANI-based medoid clustering
The ANI clusters provide a high resolution view of the below-species structure of the datasets and facilitate genome-based typing.
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ANI clade 1
medoid: uncultured Rothia sp. GCA 946222235 1
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ANI clade 2
medoid: Rothia mucilaginosa GCA 004799365 1
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ANI clade 2-1
medoid: Rothia mucilaginosa GCA 004799365 1
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ANI clade 2-2
medoid: Rothia mucilaginosa GCA 014894835 1
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ANI clade 2-3
medoid: Rothia mucilaginosa GCA 029850835 1
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ANI clade 2-4
medoid: Rothia mucilaginosa GCA 905206135 1
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ANI clade 2-5
medoid: Rothia mucilaginosa GCA 023303065 1
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ANI clade 2-5-1
medoid: Rothia mucilaginosa GCA 023303065 1
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ANI clade 2-5-1-1
medoid: uncultured Rothia sp. GCA 912423225 1
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ANI clade 2-5-1-2
medoid: uncultured Rothia sp. GCA 916048395 1
1 dataset: uncultured Rothia sp. GCA 916048395 1 (ANI: 100.0%)
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ANI clade 2-5-1-3
medoid: uncultured Rothia sp. GCA 916049845 1
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ANI clade 2-5-1-4
medoid: uncultured Rothia sp. GCA 916050335 1
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ANI clade 2-5-1-5
medoid: uncultured Rothia sp. GCA 916049705 1
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ANI clade 2-5-1-6
medoid: uncultured Rothia sp. GCA 937923075 1
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ANI clade 2-5-1-7
medoid: Rothia mucilaginosa GCA 023303065 1
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ANI clade 2-5-1-8
medoid: Rothia mucilaginosa GCA 002861015 1
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ANI clade 2-5-1-9
medoid: Rothia mucilaginosa GCA 015259985 1
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ANI clade 2-5-1-10
medoid: Rothia mucilaginosa GCA 905371495 1
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ANI clade 2-5-1-11
medoid: Rothia mucilaginosa GCA 905371335 1
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ANI clade 2-5-1-12
medoid: Rothia mucilaginosa GCA 015259995 1
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ANI clade 2-5-1-1
medoid: uncultured Rothia sp. GCA 912423225 1
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ANI clade 2-5-2
medoid: uncultured Rothia sp. GCA 934643515 1
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ANI clade 2-5-3
medoid: uncultured Rothia sp. GCA 934636215 1
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ANI clade 2-5-1
medoid: Rothia mucilaginosa GCA 023303065 1
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ANI clade 2-1
medoid: Rothia mucilaginosa GCA 004799365 1
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ANI clade 3
medoid: Rothia aeria GCA 905370405 1
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ANI clade 4
medoid: Rothia sp. ND6WE1A GCA 001683935 1
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ANI clade 5
medoid: Rothia mucilaginosa GCA 001065135 1
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ANI clade 6
medoid: Rothia sp. P100 GCA 023712425 1
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ANI clade 7
medoid: Rothia sp. ZJ932 GCA 016924835 1
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ANI clade 8
medoid: uncultured Rothia sp. GCA 902373285 1
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ANI clade 9
medoid: uncultured Rothia sp. GCA 902461355 1
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ANI clade 10
medoid: Rothia nasimurium GCA 928382285 1
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ANI clade 11
medoid: Rothia nasisuis GCA 928392685 1
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ANI clade 12
medoid: Rothia nasimurium GCA 928391935 1
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ANI clade 13
medoid: Rothia koreensis GCA 004136575 1
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ANI clade 14
medoid: Rothia kristinae GCA 025150355 1