AAI-based medoid clustering

The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.

• AAI clade 1 medoid: S10C300
• AAI clade 2 medoid: S20C2072
• AAI clade 3 medoid: S2C1070
  • AAI clade 3-1 medoid: S15C446
    • AAI clade 3-1-1 medoid: AR CG1 BINS 100 020
    • AAI clade 3-1-2 medoid: AR G1 norm MB BINS 100 24
    • AAI clade 3-1-3 medoid: CL LV1 BINS 100 036
    • AAI clade 3-1-4 medoid: ES AV norm MB BINS 10 5
    • AAI clade 3-1-5 medoid: ES CA1 norm BINS 20 005
    • AAI clade 3-1-6 medoid: RO FF MB BINS 100 30
      1 dataset: RO FF MB BINS 100 30 (AAI: 100.0%)
    • AAI clade 3-1-7 medoid: S26C1234
    • AAI clade 3-1-8 medoid: RO FF norm MB BINS 100 13
    • AAI clade 3-1-9 medoid: S15C446
  • AAI clade 3-2 medoid: CL AN BINS 10 002
  • AAI clade 3-3 medoid: S11C1073
  • AAI clade 3-4 medoid: S5C481
  • AAI clade 3-5 medoid: ES AV norm BINS 60 012
  • AAI clade 3-6 medoid: S10C347
  • AAI clade 3-7 medoid: ES CO1 MB BINS 60 15
  • AAI clade 3-8 medoid: ES CO1 norm BINS 100 014
  • AAI clade 3-9 medoid: S11C156
  • AAI clade 3-10 medoid: S19C1925
  • AAI clade 3-11 medoid: S11C6011
  • AAI clade 3-12 medoid: TR TUZ2 norm BINS 100 036
  • AAI clade 3-13 medoid: S22C2555