AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 2
medoid: Longibacter salinarum GCF 002554795 1
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AAI clade 3
medoid: Candidatus Pyrohabitans jungbluthii GCA 002010065 2
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AAI clade 3-1
medoid: Candidatus Freyrarchaeum guaymaensis GCA 030587405 1
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AAI clade 3-2
medoid: Candidatus Pyrohabitans jungbluthii GCA 002010065 2
6 datasets: Candidatus Pyrohabitans jungbluthii GCA 002010065 2 (AAI: 100.0%), Acidiplasma aeolicum GCF 001399695 1 (AAI: 38.0%), Actinarchaeum halophilum GCF 027563145 1 (AAI: 38.35%), Hadarchaeum yellowstonense asm GCA 001515205 2 (AAI: 41.57%), Hydrothermarchaeum profundi asm GCA 002011125 1 (AAI: 48.17%), and Nanobdella aerobiophila GCF 023169545 1 (AAI: 35.3%)
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AAI clade 3-1
medoid: Candidatus Freyrarchaeum guaymaensis GCA 030587405 1