AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 1-1
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 1-2
medoid: Alkalidesulfovibrio alkalitolerans DSM 16529 GCF 000422245 1
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AAI clade 1-2-1
medoid: Alkalidesulfovibrio alkalitolerans DSM 16529 GCF 000422245 1
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AAI clade 1-2-2
medoid: Candidatus Colisoma equi GCA 018064965 1
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AAI clade 1-2-3
medoid: Lentisphaera araneosa HTCC2155 GCF 000170755 1
2 datasets: Lentisphaera araneosa HTCC2155 GCF 000170755 1 (AAI: 100.0%) and Akkermansia biwaensis GCF 026072915 1 (AAI: 40.21%)
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AAI clade 1-2-4
medoid: Adhaeretor mobilis GCF 007741515 1
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AAI clade 1-2-1
medoid: Alkalidesulfovibrio alkalitolerans DSM 16529 GCF 000422245 1
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AAI clade 1-1
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 2
medoid: Longibacter salinarum GCF 002554795 1
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AAI clade 3
medoid: Candidatus Pyrohabitans jungbluthii GCA 002010065 2