AAI-based medoid clustering
The AAI clusters provide a good overview of the above-species structure of the datasets and facilitate taxonomic classification.
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AAI clade 1
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 1-1
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 1-1-1
medoid: Nitrolancea hollandica Lb GCF 000297255 1
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AAI clade 1-1-1-1
medoid: Abditibacterium utsteinense GCF 002973605 1
1 dataset: Abditibacterium utsteinense GCF 002973605 1 (AAI: 100.0%)
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AAI clade 1-1-1-2
medoid: Acaricomes phytoseiuli DSM 14247 GCF 000376245 1
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AAI clade 1-1-1-3
medoid: Armatimonas rosea GCF 014202505 1
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AAI clade 1-1-1-4
medoid: Candidatus Aeolococcus gillhamiae GCA 003244045 1
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AAI clade 1-1-1-5
medoid: Saccharimonas aalborgensis asm GCF 000392435 1
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AAI clade 1-1-1-6
medoid: Nitrolancea hollandica Lb GCF 000297255 1
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AAI clade 1-1-1-7
medoid: Acaryochloris marina MBIC11017 GCF 000018105 1
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AAI clade 1-1-1-8
medoid: Vulcanimicrobium alpinum GCF 027923555 1
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AAI clade 1-1-1-1
medoid: Abditibacterium utsteinense GCF 002973605 1
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AAI clade 1-1-2
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 1-1-1
medoid: Nitrolancea hollandica Lb GCF 000297255 1
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AAI clade 1-2
medoid: Alkalidesulfovibrio alkalitolerans DSM 16529 GCF 000422245 1
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AAI clade 1-1
medoid: Thermosulfidibacter takaii ABI70S6 GCF 001547735 1
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AAI clade 2
medoid: Longibacter salinarum GCF 002554795 1
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AAI clade 3
medoid: Candidatus Pyrohabitans jungbluthii GCA 002010065 2