Information Systems


Publications
4

Effects of Candidatus Liberibacter asiaticus infection on metagenome of Diaphorina citri gut endosymbiont

Citation
Pan et al. (2023). Scientific Data 10 (1)
Names
Ca. Liberibacter asiaticus
Abstract
AbstractAsian citrus psyllid (Diaphorina citri, D. citri) is the important vector of “Candidatus Liberibacter asiaticus” (CLas), associated with Huanglongbing, the most devastating citrus disease worldwide. CLas can affect endosymbiont abundance of D. citri. Here, we generated the high-quality gut endosymbiont metagenomes of Diaphorina citri on the condition of CLas infected and uninfected. The dataset comprised 6616.74 M and 6586.04 M raw reads, on overage, from CLas uninfected and infected psy

Metagenome sequencing and 98 microbial genomes from Juan de Fuca Ridge flank subsurface fluids

Citation
Jungbluth et al. (2017). Scientific Data 4 (1)
Names
“Hydrothermarchaeota” Hydrothermarchaeum profundi Ts Hydrothermus pacificus Ts
Abstract
AbstractThe global deep subsurface biosphere is one of the largest reservoirs for microbial life on our planet. This study takes advantage of new sampling technologies and couples them with improvements to DNA sequencing and associated informatics tools to reconstruct the genomes of uncultivated Bacteria and Archaea from fluids collected deep within the Juan de Fuca Ridge subseafloor. Here, we generated two metagenomes from borehole observatories located 311 meters apart and, using binning tools