Genetics


Publications
355

Draft Genome Sequence of “ Candidatus Liberibacter asiaticus” from a Citrus Tree in San Gabriel, California

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
Ca. Liberibacter asiaticus
Abstract
ABSTRACT The draft genome sequence of “ Candidatus Liberibacter asiaticus” strain SGCA5 from an orange citrus tree in San Gabriel, California, is reported here. SGCA5 has a genome size of 1,201,445 bp, a G+C content of 36.4%, 1,152 predicted open reading frames (ORFs), and 42 RNA genes.

Whole-Genome Sequence of “ Candidatus Profftella armatura” from Diaphorina citri in Guangdong, China

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
Ca. Profftella armatura
Abstract
ABSTRACT The genome of “ Candidatus Profftella armatura” strain YCPA from Diaphorina citri in Guangdong, China, was sequenced. The strain has a chromosome of 457,565 bp, 24.3% G+C content, 364 predicted open reading frames (ORFs), and 38 RNAs, and a plasmid, pYCPA54, of 5,458 bp with 23.9% G+C content and 5 ORFs.

De Novo Genome Sequence of “ Candidatus Liberibacter solanacearum” from a Single Potato Psyllid in California

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
“Liberibacter solanacearum”
Abstract
ABSTRACT The draft genome sequence of “ Candidatus Liberibacter solanacearum” strain RSTM from a potato psyllid ( Bactericera cockerelli ) in California is reported here. The RSTM strain has a genome size of 1,286,787 bp, a G+C content of 35.1%, 1,211 predicted open reading frames (ORFs), and 43 RNA genes.

Draft Genome Sequence of “ Candidatus Bacteroides periocalifornicus,” a New Member of the Bacteriodetes Phylum Found within the Oral Microbiome of Periodontitis Patients

Citation
McLean et al. (2015). Genome Announcements 3 (6)
Names
Ca. Bacteroides periocalifornicus
Abstract
ABSTRACT Here we present the draft genome of a distantly related member within the phylum Bacteriodetes , “ Candidatus Bacteroides periocalifornicus .” The draft genome sequence was assembled with metagenomic data from a patient with periodontitis. The closest relative has less than 68% average nucleic identity, supporting a novel family within Bacteriodetes .

Draft Genome Sequence of “ Candidatus Liberibacter asiaticus” from Diaphorina citri in Guangdong, China

Citation
Wu et al. (2015). Genome Announcements 3 (6)
Names
Ca. Liberibacter asiaticus
Abstract
ABSTRACT The draft genome sequence of “ Candidatus Liberibacter asiaticus” strain YCPsy from an Asian citrus psyllid ( Diaphorina citri ) in Guangdong, China, is reported here. The YCPsy strain has a genome size of 1,233,647 bp, 36.5% G+C content, 1,171 open reading frames (ORFs), and 53 RNAs.

Genome Sequence of “ Candidatus Thioglobus singularis” Strain PS1, a Mixotroph from the SUP05 Clade of Marine Gammaproteobacteria

Citation
Marshall, Morris (2015). Genome Announcements 3 (5)
Names
Ca. Thioglobus singularis
Abstract
ABSTRACT Mixotrophic marine bacteria from the SUP05 clade are ubiquitous in the ocean. Here, we announce the complete genome sequence of “ Candidatus Thioglobus singularis” strain PS1, the first cultured mixotrophic representative from the SUP05 clade.

Draft Genome Sequence of “ Candidatus Phytoplasma pruni” Strain CX, a Plant-Pathogenic Bacterium

Citation
Lee et al. (2015). Genome Announcements 3 (5)
Names
Ca. Phytoplasma pruni
Abstract
ABSTRACT “ Candidatus Phytoplasma pruni” strain CX, belonging to subgroup 16SrIII-A, is a plant-pathogenic bacterium causing economically important diseases in many fruit crops. Here, we report the draft genome sequence, which consists of 598,508 bases, with a G+C content of 27.21 mol%.

Genome Sequence of “ Candidatus Thioglobus autotrophica” Strain EF1, a Chemoautotroph from the SUP05 Clade of Marine Gammaproteobacteria

Citation
Shah, Morris (2015). Genome Announcements 3 (5)
Names
Ca. Thioglobus autotrophica
Abstract
ABSTRACT Chemoautotrophic marine bacteria from the SUP05 clade of marine gammaproteobacteria often dominate low-oxygen waters in upwelling regions, fjords, and hydrothermal systems. Here, we announce the complete genome sequence of “ Candidatus Thioglobus autotrophica” strain EF1, the first cultured chemoautotrophic representative from the SUP05 clade.

Complete Genome Sequence of “ Candidatus Liberibacter africanus,” a Bacterium Associated with Citrus Huanglongbing

Citation
Lin et al. (2015). Genome Announcements 3 (4)
Names
Ca. Liberibacter africanus
Abstract
ABSTRACT We report here the complete genome sequence of “ Candidatus Liberibacter africanus” strain PTSAPSY. The 1,192,232-bp genome with 34.5% G+C content comprises 1,017 open reading frames, 44 tRNAs, and three complete rRNAs in a circular chromosome.