Search results (41)


Complete Genome Sequence of “ <i>Candidatus</i> Phytoplasma asteris” QS2022, a Plant Pathogen Associated with Lettuce Chlorotic Leaf Rot Disease in China

Citation
Yan et al. (2023). Microbiology Resource Announcements
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
The complete genome sequence of “ Candidatus Phytoplasma asteris” QS2022, which consists of one 834,303-bp circular chromosome, is presented in this work. This bacterium is associated with lettuce chlorotic leaf rot disease in Fujian Province, China.

Complete Genome of “ <i>Candidatus</i> Phytoplasma rubi” RS, a Phytopathogenic Bacterium Associated with <i>Rubus</i> Stunt Disease

Citation
Duckeck et al. (2023). Microbiology Resource Announcements 12 (5)
Names
Ca. Phytoplasma rubi
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
The phytoplasma “ Candidatus Phytoplasma rubi” is associated with Rubus stunt disease. The complete genome was determined by assembling Oxford Nanopore Technologies system-derived long reads, with short-read polishing with Illumina reads. The genome of strain RS, from Germany, is organized in one circular chromosome with a length of 762 kb.

Genome Sequence of a Clinical Isolate of the Human Pathogenic Strain “ <i>Candidatus</i> Borrelia fainii” Qtaro

Citation
Itokawa et al. (2023). Microbiology Resource Announcements 12 (5)
Names
Ca. Borrelia fainii
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
We report sequences of the complete linear chromosome and five linear plasmids of the relapsing fever spirochete “ Candidatus Borrelia fainii” Qtaro. The chromosome sequence of 951,861 bp and the 243,291 bp of plasmid sequences were predicted to contain 852 and 239 protein-coding genes, respectively. The predicted total GC content was 28.4%.

Draft Genome Sequences of Three “ <i>Candidatus</i> Symbiopectobacterium” Isolates Collected from Potato Tubers Grown in New Zealand

Citation
Nunes Leite et al. (2023). Microbiology Resource Announcements 12 (3)
Names
Ca. Symbiopectobacterium
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
The draft genome sequences of three “ Candidatus Symbiopectobacterium” isolates that were collected from New Zealand-grown potato tubers represent the first report of this proposed taxon in the Southern Hemisphere. Their symbiosis with insects and nematodes and their presence on plants may lead to new strategies for pest control and crop management.

Metagenome-Assembled Genomes for “ <i>Candidatus</i> Phormidium sp. Strain AB48” and Co-occurring Microorganisms from an Industrial Photobioreactor Environment

Citation
Noonan et al. (2022). Microbiology Resource Announcements 11 (12)
Names
Ca. Phormidium
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
Here, we report metagenome-assembled genomes for “ Candidatus Phormidium sp. strain AB48” and three cooccurring microorganisms from a biofilm-forming industrial photobioreactor environment, using the PacBio sequencing platform. Several mobile genetic elements, including a double-stranded DNA phage and plasmids, were also recovered, with the potential to mediate gene transfer within the biofilm community.

Draft Genome Sequence of a Washington Isolate of “ <i>Candidatus</i> Phytoplasma pruni”

Citation
Wright, Harper (2022). Microbiology Resource Announcements 11 (12)
Names
Ca. Phytoplasma pruni
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
Illumina sequencing of a Prunus avium tree with X-disease symptoms was performed to obtain a draft genome of “ Candidatus Phytoplasma pruni.” The genome consists of 14 contigs covering 588,767 bp. This is the first metagenome to be sequenced from the current X-disease epidemic in stone fruit in the Pacific Northwest.

Draft Genome Sequence of “ <i>Candidatus</i> Nardonella dryophthoridicola” Strain NARMHE1, Endosymbiont of Metamasius hemipterus (Coleoptera, Curculionidae, Dryophthorinae)

Citation
Palmieri et al. (2022). Microbiology Resource Announcements 11 (11)
Names
Ca. Nardonella dryophthoridicola
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
Here, we report the draft genome and annotation of “ Candidatus Nardonella dryophthoridicola” strain NARMHE1, obtained via Oxford Nanopore sequencing of the ovaries of its host, the weevil Metamasius hemipterus , from a population from southeast Brazil.

Draft Genome Sequences of Nine “ <i>Candidatus</i> Nanosynbacter sp. HMT-352” Strains Cultured from the Human Oral Cavity

Citation
Liu et al. (2022). Microbiology Resource Announcements 11 (8)
Names
Ca. Saccharibacteria Ca. Nanosynbacter
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
Here, we report draft genome sequences for nine strains of “ Candidatus Nanosynbacter sp. HMT-352.” These strains and their sequences were used to interrogate strain-level variations in host range, gene content, and growth dynamics among the phylum “ Candidatus Saccharibacteria.”

Complete Genome Sequence of “ <i>Candidatus</i> Nanosynbacter” Strain HMT-348_TM7c-JB, a Member of <i>Saccharibacteria</i> Clade G1

Citation
Baker (2022). Microbiology Resource Announcements 11 (5)
Names
Ca. Nanosynbacter
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
Saccharibacteria are abundant and diverse members of the human oral microbiome; however, they are poorly understood and appear to exhibit an epibiont/parasitic lifestyle dependent on host bacteria. Here, a complete metagenome-assembled genome (MAG) sequence of an organism from Saccharibacteria clade G1 human microbial taxon (HMT) 348 is reported, strain HMT-348_TM7c-JB.

Genome Sequence of a New “ <i>Candidatus</i> ” Phylum “Dependentiae” Isolate from Chiba, Japan

Citation
Takemura (2022). Microbiology Resource Announcements 11 (2)
Names
Ca. Dependentiae
Subjects
Genetics Immunology and Microbiology (miscellaneous) Molecular Biology
Abstract
Little is known about the bacterial phylum “ Candidatus Dependentiae,” because only three isolates have been reported. Here, I report the isolation and genome sequencing of a new member of this phylum, strain Noda2021. This is the fourth strain isolated from the phylum “ Candidatus Dependentiae.”