Ochrobactrum gambitense

Citation

Formal styling

Ochrobactrum gambitense Díaz Rodríguez et al., 2022

Proposed by

Díaz Rodríguez et al., 2022

Status

Valid (SeqCode)

Register List

seqco.de/r:xwx6hrsf (validated)

Nomenclature

Rank

Species

Syllabication

gam.bi.ten'se

Etymology

N.L. neut. adj. gambitense, of Gambita, the municipally where soil samples were taken to select the minimal lignocellulolytic bacterial consortium "MELMC"

Nomenclatural type

INSDC Nucleotide: CP098020

Taxonomy

Description

The species is established on the basis of MiGA taxonomic novelty analysis, and the type material is the genome MAG4.

Classification

Bacteria » Pseudomonadota » Alphaproteobacteria » Hyphomicrobiales » Brucellaceae » Ochrobactrum » Ochrobactrum gambitense

Parent

Ochrobactrum

Genomics

Accession

INSDC Nucleotide: CP098020

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 90.0%
• Contamination: 0.0%
• Quality: 90.0

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 100.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 42 amino acids

Sequencing depth

62.0 ×

Source

• BioSample: SAMN28659272

Other features

• G+C Content: 57.2%
• Coding Density: 86.64%
• Codon Table: 11
• N50: 2,526,949 bp
• Contigs: 1
• Assembly Length: 2,526,949 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

Metadata

Search sequences

• NCBI Nucleotide

Local history

This name was last modified 5 months ago

Registered by

djimenez 11 months ago

Submitted by

djimenez 6 months ago

Approved by

MarikePalmer 6 months ago

Validated by

MarikePalmer 6 months ago