Terraquivivens yellowstonensis


Citation

Formal styling
Terraquivivens yellowstonensis Buessecker et al., 2022
Proposed by
Buessecker et al., 2022
Status
Valid (SeqCode)
Register List
seqco.de/r:slp2ijs4 (validated)
Cannonical URL
https://seqco.de/i:22830

Nomenclature

Rank
Species
Syllabication
yel.low.ston.en'sis
Etymology
N.L. fem. adj. yellowstonensis, of Yellowstone, referring to Yellowstone National Park, USA, where this organism was identified from
Nomenclatural type
NCBI Assembly: GCA_023539445.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Seven MAGs for this species were identified from four different springs in Yellowstone National Park, USA. The genomes are between 1,073,374 bp and 1,275,530 bp, in 19 to 35 contigs, and have a G+C content between 45.9 and 46.1 %. Completeness and contamination estimates based on CheckM are between 94.17 and 97.08 %, and 0 to 1.94 %, respectively. Phylogenomics with the ar122 markers robustly place this species in the genus Terraquivivens, in the family Wolframiiraptoraceae. ANI values among genomes for this species are 98-100 %, with all other pairwise values compared to members of the genus below 85 %. The gene encoding Sqr (sulfide:quinone oxidoreductase) is present in some members of the species, however, most of the genomes lack this gene. All genomes belonging to the species lack an AOR-like encoding gene that is conserved within the rest of the family, and possess an unknown oxidoreductase that is shared with Terraquivivens tengchongensis, however, the substrates for these enzymes are still unclear.
Classification
Incertae sedis (Archaea) » “Caldarchaeales” » Wolframiiraptoraceae » Terraquivivens » Terraquivivens yellowstonensis
Parent
Terraquivivens

Genomics

Accession
NCBI Assembly: GCA_023539445.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.11%
  • Contamination: 0.0%
  • Quality: 96.11
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
80.0 ×
Source
Other features
  • G+C Content: 46.1%
  • Coding Density: 91.76%
  • Codon Table: 11
  • N50: 105,389 bp
  • Contigs: 35
  • Assembly Length: 1,158,832 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
MarikePalmer about 2 years ago
Submitted by
MarikePalmer about 1 year ago
Validated by
miguel about 1 year ago

Publications (1)

Citation Title
Buessecker et al., 2022, Nature Communications An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea
Proposed this name



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