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Methanomethylophilus alviT

Citation

Formal styling
Methanomethylophilus alviT Borrel et al., 2023
Effective publication
Borrel et al., 2023
SeqCode status
Valid (ICNP)
Cannonical URL
https://seqco.de/i:125

Nomenclature

Rank
Species
Syllabication
al'vi
Etymology
L. gen. n. alvi, of the bowel, referring to the isolation source (human gut).
Nomenclatural type
NCBI Assembly: CP017686
Reference strain
Mx-05 = JCM31474T = CIP112449

Taxonomy

Description
The strain Mx-05 was isolated from the human gut. The cells of Mx-05T are non-motile cocci 0.4–0.7 μm in diameter. They grow anaerobically and reduced methanol, mono-, di-, and trimethylamine into methane, using H2 as an electron donor. Mx-05 grows at temperature range between 30 °C and 40 °C (optimum 37 °C), over a pH range of 6.9–8.3 (optimum pH 7.5). The genome is 1.67 Mbp with a G+C content of 55.5 mol%.
Classification
Archaea » “Euryarchaeota” » Thermoplasmata » Methanomassiliicoccales » Methanomethylophilaceae » Methanomethylophilus » Methanomethylophilus alviT
Parent
Methanomethylophilus ncbi assigned in Borrel et al., 2012

Genomics

Accession
NCBI Assembly:CP017686
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 55.5%
Automated checks
Failed: Cannot find ncbi:assembly:CP017686
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Protasov, Evgenii 8 months ago
Submitted by
Protasov, Evgenii 12 days ago
Curators
Reported valid by
Palmer, Marike 11 days ago

Publications
4

Citation Title
Borrel et al., 2023, Microorganisms Methanomethylophilus alvi gen. nov., sp. nov., a Novel Hydrogenotrophic Methyl-Reducing Methanogenic Archaea of the Order Methanomassiliicoccales Isolated from the Human Gut and Proposal of the Novel Family Methanomethylophilaceae fam. nov
Effective publication
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Oren, 2017, International Journal of Systematic and Evolutionary Microbiology A plea for linguistic accuracy – also for Candidatus taxa
Borrel et al., 2012, Journal of Bacteriology Genome Sequence of “Candidatus Methanomethylophilus alvus” Mx1201, a Methanogenic Archaeon from the Human Gut Belonging to a Seventh Order of Methanogens
Assigned this taxon


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