JSON

Genome sc|0000501

Name

Roseiconus lacunae

Database

NCBI Assembly

Accession

GCA_008312935.1

Genomics

Accession
NCBI Assembly:GCA_008312935.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 93.4%
  • Contamination: 0.9%
  • Quality: 88.9
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 55.13%
  • Coding Density: 86.85%
  • Codon Table: 11
  • N50: 466,683 bp
  • Contigs: 97
  • Largest Contig: 1,732,674 bp
  • Assembly Length: 7,949,947 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-05-18
Location
Not detected
Toponym
Geo Loc Name: India: Chilika lagoon
Environment
Sample Type: Sediment
Isolation Source: sediment
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license