SeqCode Registry
cognitis nomina
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Genomes
sc|0000457
JSON
Genome sc|0000457
Name
Thermobaculum terrenum
Ts
Database
NCBI Assembly
Accession
GCF_000025005.1
Genomics
Accession
NCBI Assembly:
GCF_000025005.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.58%
Contamination:
0.0%
Quality:
98.58
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 100.0%)
2 23S rRNAs (up to 100.0%)
tRNAs for 19 amino acids
Sequencing depth
10.0 ×
Source
BioSample: SAMN00017581
Other features
G+C Content:
53.51%
Coding Density:
91.52%
Codon Table:
11
N50:
2,026,947 bp
Contigs:
2
Largest Contig:
2,026,947 bp
Assembly Length:
3,101,581 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Sample Metadata
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ncbi Submission Package:
Generic.1.0
Biosamplemodel:
Generic
All retrieved samples
SAMN00017581
: Generic sample from Thermobaculum terrenum ATCC BAA-798
Metadata retrieved
4 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN00017581
×
Thermobaculum terrenum ATCC BAA-798
strain
ATCC BAA-798
INSDC secondary accession
SRS085463
NCBI submission package
Generic.1.0
organism
Thermobaculum terrenum ATCC BAA-798
sample number
4084073
BioSampleModel
Generic
ENA-FIRST-PUBLIC
2010-07-23
ENA-LAST-UPDATE
2015-11-25
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