Genome sc|0001607

Genomics

Accession

NCBI Assembly:GCA_037465725.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 97.07%
• Contamination: 0.0%
• Quality: 97.07

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 17 amino acids

Sequencing depth

97.1 ×

Source

• BioSample: SAMN37643306
• BioSample: SAMN06164399

Other features

• G+C Content: 46.0%
• Coding Density: 88.98%
• Codon Table: 11
• N50: 14,894 bp
• Contigs: 233
• Largest Contig: 48,066 bp
• Assembly Length: 2,526,953 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2019-06-11 • 2012

Location

Lat Lon: 37.0902 N 95.7129 W

Toponym

Geo Loc Name: USA

Environment

Sample Type: metagenomic assembly

Isolation Source: feces

Env Broad Scale: ENVO:00009003

Env Local Scale: ENVO:2100002

Env Medium: ENVO:00002003

Other

Host: Homo sapiens

Package

Ncbi Package: MIMAG.6.0 • MIMS.me.human-gut.6.0

Additional Accessions

SRR6028624

All retrieved samples

• SAMN37643306: MIMAG Metagenome-assembled Genome sample from Ruminococcus sp.
• SAMN06164399: 10083403_SF05.dna

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Metadata retrieved about 1 month ago