Genome sc|0001482

Genomics

Accession

NCBI Assembly:GCA_033865115.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 90.5%
• Contamination: 0.0%
• Quality: 90.5

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 2 23S rRNAs (up to 74.0%)
• tRNAs for 19 amino acids

Sequencing depth

33.0 ×

Source

• BioSample: SAMN37757700

Other features

• G+C Content: 52.96%
• Coding Density: 95.73%
• Codon Table: 11
• N50: 8,774 bp
• Contigs: 239
• Largest Contig: 46,186 bp
• Assembly Length: 1,516,212 bp
• Ambiguous Assembly Fraction: 0.14%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2016-01-27

Location

Lat Lon: 33.991019 S 151.232503 E

Toponym

Geo Loc Name: Australia: NSW, Sydney, Bare Island

Environment

Sample Type: metagenomic assembly

Isolation Source: bacterial pellet from adult marine sponge

Env Broad Scale: marine biome [ENVO:00000447]|marine benthic biome[ENVO:01000024]|marine subtidal rocky reef biome[ENVO:01000050]

Env Local Scale: coastal sea water[ENVO:00002150]

Env Medium: coastal sea water[ENVO:00002150]

Other

Host: Crella incrustans levis

Package

Ncbi Submission Package: MIMAG.symbiont-associated.6.0

Biosamplemodel: MIMAG.symbiont-associated

Additional Accessions

SAMN13290125

All retrieved samples

• SAMN37757700: MIMAG Metagenome-assembled Genome sample of Candidatus Persebacter sydneyensis

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Metadata retrieved 4 months ago