JSON

Genome sc|0001469

Name

Mesorhizobium australafricanum

Database

NCBI Assembly

Accession

GCA_033977265.1

Genomics

Accession
NCBI Assembly:GCA_033977265.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 0.9%
  • Quality: 94.6
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
153.1 ×
Source
Other features
  • G+C Content: 63.15%
  • Coding Density: 85.56%
  • Codon Table: 11
  • N50: 348,747 bp
  • Contigs: 76
  • Largest Contig: 726,971 bp
  • Assembly Length: 6,463,337 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2013
Location
Lat Lon: 32.5699 S 27.4269 E
Toponym
Geo Loc Name: South Africa: Stutterheim, Eastern Cape
Environment
Isolation Source: root nodules
Env Broad Scale: Soil
Env Local Scale: Root nodule
Env Medium: Root nodule
Other
Host: Vachellia karroo
Package
Ncbi Submission Package: MIGS.ba.plant-associated.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.plant-associated
All retrieved samples
Metadata retrieved 4 months ago


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