JSON

Genome sc|0001020

Name

Taurinivorans murisTs

Database

NCBI Assembly

Accession

GCA_025232395.1

Genomics

Accession
NCBI Assembly:GCA_025232395.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 4 16S rRNAs (up to 100.0%)
  • 4 23S rRNAs (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
30.0 ×
Source
Other features
  • G+C Content: 43.6%
  • Coding Density: 89.13%
  • Codon Table: 11
  • N50: 2,172,708 bp
  • Contigs: 1
  • Largest Contig: 2,172,708 bp
  • Assembly Length: 2,172,708 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-03-26
Location
Lat Lon: 48.36 N 16.36 E
Toponym
Geo Loc Name: Austria
Environment
Sample Type: cell culture
Isolation Source: feces
Env Broad Scale: gut
Env Local Scale: Austria
Env Medium: feces
Other
Host: Mus musculus
Rel To Oxygen: anaerobe
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


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