Pilgrim, Jack

Publications (2)

Genomic diversity across the Rickettsia and ‘Candidatus Megaira’ genera and proposal of genus status for the Torix group

Davison et al. (2022). Nature Communications 13 (1)
Names (2)
“Tisiphia” Ca. Megaira
General Biochemistry, Genetics and Molecular Biology General Chemistry General Physics and Astronomy Multidisciplinary
AbstractMembers of the bacterial genusRickettsiawere originally identified as causative agents of vector-borne diseases in mammals. However, manyRickettsiaspecies are arthropod symbionts and close relatives of ‘CandidatusMegaira’, which are symbiotic associates of microeukaryotes. Here, we clarify the evolutionary relationships between these organisms by assembling 26 genomes ofRickettsiaspecies from understudied groups, including the Torix group, and two genomes of ‘Ca. Megaira’ from various insects and microeukaryotes. Our analyses of the new genomes, in comparison with previously described ones, indicate that the accessory genome diversity and broad host range of TorixRickettsiaare comparable to those of all otherRickettsiacombined. Therefore, the Torix clade may play unrecognized roles in invertebrate biology and physiology. We argue this clade should be given its own genus status, for which we propose the name ‘CandidatusTisiphia’.

Identifying candidate Culicoides spp. (Diptera: Ceratopogonidae) for the study of interactions with Candidatus Cardinium hertigii (Bacteroidetes)

Pilgrim et al. [posted content, 2020]
Names (1)
Ca. Cardinium hertigii
AbstractCulicoides biting midges (Diptera: Ceratopogonidae) are disease vectors responsible for the transmission of several viruses of economic and animal health importance. The recent deployment of Wolbachia with pathogen-blocking capacity to control viral disease transmission by mosquitoes has led to a focus on the potential use of endosymbionts to control arboviruses transmitted by other vector species. Previous screens of Culicoides have described the presence of Candidatus Cardinium hertigii (Bacteroidetes). However, the biological impact of this symbiont is yet to be uncovered and awaits a suitable system to study Cardinium-midge interactions. To identify candidate species to investigate these interactions, accurate knowledge of the distribution of the symbiont within Culicoides populations is needed. We used a sensitive nested PCR assay to screen Cardinium infection in 337 individuals of 25 Culicoides species from both Palearctic and Afrotropical regions. Infections were observed in several vector species including C. imicola and the pulicaris complex (C. pulicaris, C. bysta, C. newsteadi and C. punctatus) with prevalence ranging from low and intermediate, to fixation. Infection in C. pulicaris was very rare in comparison to a previous study, and there is evidence the prior record of high prevalence represents a laboratory contamination error. Phylogenetic analysis based on the Gyrase B gene sequence grouped all new isolates within “group C” of the genus, a clade which has to date been exclusively described in Culicoides. Through a comparison of our results with previous screens, we evaluate the suitability of Cardinium-infected species for future work pertaining to the symbiont.